A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv23403



Internal ID15483844
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:30565838..30575005hg38UCSC Ensembl
Outerchr15:30565628..30575013hg38UCSC Ensembl
Innerchr15:30858041..30867208hg19UCSC Ensembl
Outerchr15:30857831..30867216hg19UCSC Ensembl
Innerchr15:28645333..28654500hg18UCSC Ensembl
Outerchr15:28645123..28654508hg18UCSC Ensembl
Innerchr15:28645333..28654500hg17UCSC Ensembl
Outerchr15:28645123..28654508hg17UCSC Ensembl
Cytoband15q13.2
Allele length
AssemblyAllele length
hg389386
hg199386
hg189386
hg179386
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9232
Supporting Variants
SamplesNA12155
Known GenesULK4P1, ULK4P2
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv23403
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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