A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv23352



Internal ID15488667
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:33284400..33507197hg38UCSC Ensembl
Outerchr16:33283946..33513598hg38UCSC Ensembl
Innerchr16:33185641..33309664hg19UCSC Ensembl
Outerchr16:33185187..33316065hg19UCSC Ensembl
Innerchr16:33093142..33217165hg18UCSC Ensembl
Outerchr16:33092688..33223566hg18UCSC Ensembl
Innerchr16:33093142..33217165hg17UCSC Ensembl
Outerchr16:33092688..33223566hg17UCSC Ensembl
Cytoband16p11.2
Allele length
AssemblyAllele length
hg38229653
hg19130879
hg18130879
hg17130879
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9439
Supporting Variants
SamplesNA18552
Known GenesLOC390705, TP53TG3, TP53TG3B, TP53TG3C
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv23352
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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