A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv23316



Internal ID15483441
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:30620488..30679355hg38UCSC Ensembl
Outerchr15:30617917..30680511hg38UCSC Ensembl
Innerchr15:30912691..30971558hg19UCSC Ensembl
Outerchr15:30910120..30972714hg19UCSC Ensembl
Innerchr15:28699983..28758850hg18UCSC Ensembl
Outerchr15:28697412..28760006hg18UCSC Ensembl
Innerchr15:28699983..28758850hg17UCSC Ensembl
Outerchr15:28697412..28760006hg17UCSC Ensembl
Cytoband15q13.2
Allele length
AssemblyAllele length
hg3862595
hg1962595
hg1862595
hg1762595
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9232
Supporting Variants
SamplesNA11830
Known GenesARHGAP11B, LOC100288637
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv23316
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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