A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv23271



Internal ID15490301
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr22:38963148..38990517hg38UCSC Ensembl
Outerchr22:38962558..38991992hg38UCSC Ensembl
Innerchr22:39359153..39386522hg19UCSC Ensembl
Outerchr22:39358563..39387997hg19UCSC Ensembl
Innerchr22:37689099..37716468hg18UCSC Ensembl
Outerchr22:37688509..37717943hg18UCSC Ensembl
Innerchr22:37683653..37711022hg17UCSC Ensembl
Outerchr22:37683063..37712497hg17UCSC Ensembl
Cytoband22q13.1
Allele length
AssemblyAllele length
hg3829435
hg1929435
hg1829435
hg1729435
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9907
Supporting Variants
SamplesNA18572
Known GenesAPOBEC3A, APOBEC3A_B, APOBEC3B, APOBEC3B-AS1
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv23271
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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