A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv23232



Internal ID15483613
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:30377895..30391262hg38UCSC Ensembl
Outerchr15:30377331..30393306hg38UCSC Ensembl
Innerchr15:30670098..30683465hg19UCSC Ensembl
Outerchr15:30669534..30685509hg19UCSC Ensembl
Innerchr15:28457390..28470757hg18UCSC Ensembl
Outerchr15:28456826..28472801hg18UCSC Ensembl
Innerchr15:28457390..28470757hg17UCSC Ensembl
Outerchr15:28456826..28472801hg17UCSC Ensembl
Cytoband15q13.2
Allele length
AssemblyAllele length
hg3815976
hg1915976
hg1815976
hg1715976
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9232
Supporting Variants
SamplesNA11830
Known GenesCHRFAM7A
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv23232
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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