A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv23212



Internal ID15489015
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:32601276..32687536hg38UCSC Ensembl
Outerchr16:32599871..32687839hg38UCSC Ensembl
Innerchr16:32612597..32698857hg19UCSC Ensembl
Outerchr16:32611192..32699160hg19UCSC Ensembl
Innerchr16:32520098..32606358hg18UCSC Ensembl
Outerchr16:32518693..32606661hg18UCSC Ensembl
Innerchr16:32520098..32606358hg17UCSC Ensembl
Outerchr16:32518693..32606661hg17UCSC Ensembl
Cytoband16p11.2
Allele length
AssemblyAllele length
hg3887969
hg1987969
hg1887969
hg1787969
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9439
Supporting Variants
SamplesNA18552
Known GenesTP53TG3, TP53TG3B, TP53TG3C
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv23212
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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