A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv23204



Internal ID15483651
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:30103924..30133079hg38UCSC Ensembl
Outerchr15:30103430..30134459hg38UCSC Ensembl
Innerchr15:30396127..30425282hg19UCSC Ensembl
Outerchr15:30395633..30426662hg19UCSC Ensembl
Innerchr15:28183419..28212574hg18UCSC Ensembl
Outerchr15:28182925..28213954hg18UCSC Ensembl
Innerchr15:28183419..28212574hg17UCSC Ensembl
Outerchr15:28182925..28213954hg17UCSC Ensembl
Cytoband15q13.2
Allele length
AssemblyAllele length
hg3831030
hg1931030
hg1831030
hg1731030
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9232
Supporting Variants
SamplesNA11830
Known GenesULK4P1, ULK4P2, ULK4P3
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv23204
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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