A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv23184



Internal ID15489011
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:32241890..32294641hg38UCSC Ensembl
Outerchr16:32241586..32295139hg38UCSC Ensembl
Innerchr16:32253211..32305962hg19UCSC Ensembl
Outerchr16:32252907..32306460hg19UCSC Ensembl
Innerchr16:32160712..32213463hg18UCSC Ensembl
Outerchr16:32160408..32213961hg18UCSC Ensembl
Innerchr16:32160712..32213463hg17UCSC Ensembl
Outerchr16:32160408..32213961hg17UCSC Ensembl
Cytoband16p11.2
Allele length
AssemblyAllele length
hg3853554
hg1953554
hg1853554
hg1753554
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9439
Supporting Variants
SamplesNA18552
Known GenesLOC390705, TP53TG3D
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv23184
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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