A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv23140



Internal ID15842241
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:20238377..20284656hg38UCSC Ensembl
Outerchr15:20235365..20285452hg38UCSC Ensembl
Innerchr15:20443630..20489909hg19UCSC Ensembl
Outerchr15:20440618..20490705hg19UCSC Ensembl
Innerchr15:18703644..18749923hg18UCSC Ensembl
Outerchr15:18700632..18750719hg18UCSC Ensembl
Innerchr15:18703644..18749923hg17UCSC Ensembl
Outerchr15:18700632..18750719hg17UCSC Ensembl
Cytoband15q11.1
Allele length
AssemblyAllele length
hg3850088
hg1950088
hg1850088
hg1750088
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9179
Supporting Variants
SamplesNA19144
Known GenesCHEK2P2
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv23140
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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