A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv22978



Internal ID15830819
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:22007920..22012461hg38UCSC Ensembl
Outerchr15:22007482..22012852hg38UCSC Ensembl
Innerchr15:22295871..22300412hg19UCSC Ensembl
Outerchr15:22295433..22300803hg19UCSC Ensembl
Innerchr15:19797235..19801776hg18UCSC Ensembl
Outerchr15:19796797..19802167hg18UCSC Ensembl
Innerchr15:19797235..19801776hg17UCSC Ensembl
Outerchr15:19796797..19802167hg17UCSC Ensembl
Cytoband15q11.2
Allele length
AssemblyAllele length
hg385371
hg195371
hg185371
hg175371
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9179
Supporting Variants
SamplesNA12155
Known GenesLOC727924
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv22978
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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