A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv22962



Internal ID15838506
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:87117079..87211902hg38UCSC Ensembl
Outerchr10:87115880..87212664hg38UCSC Ensembl
Innerchr10:88876836..88971659hg19UCSC Ensembl
Outerchr10:88875637..88972421hg19UCSC Ensembl
Innerchr10:88866816..88961639hg18UCSC Ensembl
Outerchr10:88865617..88962401hg18UCSC Ensembl
Innerchr10:88866816..88961639hg17UCSC Ensembl
Outerchr10:88865617..88962401hg17UCSC Ensembl
Cytoband10q23.2
Allele length
AssemblyAllele length
hg3896785
hg1996785
hg1896785
hg1796785
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8715
Supporting Variants
SamplesNA18860
Known GenesFAM35A
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv22962
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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