A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv22959



Internal ID15490090
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:31951148..31956759hg38UCSC Ensembl
Outerchr16:31950983..31957322hg38UCSC Ensembl
Innerchr16:31962469..31968080hg19UCSC Ensembl
Outerchr16:31962304..31968643hg19UCSC Ensembl
Innerchr16:31869970..31875581hg18UCSC Ensembl
Outerchr16:31869805..31876144hg18UCSC Ensembl
Innerchr16:31869970..31875581hg17UCSC Ensembl
Outerchr16:31869805..31876144hg17UCSC Ensembl
Cytoband16p11.2
Allele length
AssemblyAllele length
hg386340
hg196340
hg186340
hg176340
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9439
Supporting Variants
SamplesNA18564
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv22959
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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