A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv22941



Internal ID15843357
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:75253582..75290602hg38UCSC Ensembl
Outerchr15:75252884..75291247hg38UCSC Ensembl
Innerchr15:75545923..75582943hg19UCSC Ensembl
Outerchr15:75545225..75583588hg19UCSC Ensembl
Innerchr15:73332976..73369996hg18UCSC Ensembl
Outerchr15:73332278..73370641hg18UCSC Ensembl
Innerchr15:73332976..73369996hg17UCSC Ensembl
Outerchr15:73332278..73370641hg17UCSC Ensembl
Cytoband15q24.2
Allele length
AssemblyAllele length
hg3838364
hg1938364
hg1838364
hg1738364
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9277
Supporting Variants
SamplesNA19173
Known GenesGOLGA6C, GOLGA6D
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv22941
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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