A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv22938



Internal ID15494561
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:14954923..15028611hg38UCSC Ensembl
Outerchr16:14953998..15029392hg38UCSC Ensembl
Innerchr16:15048780..15122468hg19UCSC Ensembl
Outerchr16:15047855..15123249hg19UCSC Ensembl
Innerchr16:14956281..15029969hg18UCSC Ensembl
Outerchr16:14955356..15030750hg18UCSC Ensembl
Innerchr16:14956281..15029969hg17UCSC Ensembl
Outerchr16:14955356..15030750hg17UCSC Ensembl
Cytoband16p13.11
Allele length
AssemblyAllele length
hg3875395
hg1975395
hg1875395
hg1775395
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9357
Supporting Variants
SamplesNA19007
Known GenesMIR1972-1, MIR1972-2, PDXDC1
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv22938
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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