A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv22879



Internal ID15493894
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:16293683..16305728hg38UCSC Ensembl
Outerchr16:16293371..16305904hg38UCSC Ensembl
Innerchr16:16387540..16399585hg19UCSC Ensembl
Outerchr16:16387228..16399761hg19UCSC Ensembl
Innerchr16:16295041..16307086hg18UCSC Ensembl
Outerchr16:16294729..16307262hg18UCSC Ensembl
Innerchr16:16295041..16307086hg17UCSC Ensembl
Outerchr16:16294729..16307262hg17UCSC Ensembl
Cytoband16p13.11
Allele length
AssemblyAllele length
hg3812534
hg1912534
hg1812534
hg1712534
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9363
Supporting Variants
SamplesNA18980
Known GenesMIR3179-1, MIR3179-2, MIR3179-3, NOMO3
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv22879
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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