A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv22872



Internal ID15836761
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:29588660..29602962hg38UCSC Ensembl
Outerchr16:29587950..29603515hg38UCSC Ensembl
Innerchr16:29599981..29614283hg19UCSC Ensembl
Outerchr16:29599271..29614836hg19UCSC Ensembl
Innerchr16:29507482..29521784hg18UCSC Ensembl
Outerchr16:29506772..29522337hg18UCSC Ensembl
Innerchr16:29507482..29521784hg17UCSC Ensembl
Outerchr16:29506772..29522337hg17UCSC Ensembl
Cytoband16p11.2
Allele length
AssemblyAllele length
hg3815566
hg1915566
hg1815566
hg1715566
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9429
Supporting Variants
SamplesNA18564
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv22872
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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