A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv22857



Internal ID15480658
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr17:18455768..18483282hg38UCSC Ensembl
Outerchr17:18454255..18484114hg38UCSC Ensembl
Innerchr17:18359082..18386596hg19UCSC Ensembl
Outerchr17:18357569..18387428hg19UCSC Ensembl
Innerchr17:18299807..18327321hg18UCSC Ensembl
Outerchr17:18298294..18328153hg18UCSC Ensembl
Innerchr17:18299807..18327321hg17UCSC Ensembl
Outerchr17:18298294..18328153hg17UCSC Ensembl
Cytoband17p11.2
Allele length
AssemblyAllele length
hg3829860
hg1929860
hg1829860
hg1729860
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9504
Supporting Variants
SamplesNA07029
Known GenesLGALS9C
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv22857
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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