A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv22843



Internal ID15490072
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:29556537..29575804hg38UCSC Ensembl
Outerchr16:29556500..29577285hg38UCSC Ensembl
Innerchr16:29567858..29587125hg19UCSC Ensembl
Outerchr16:29567821..29588606hg19UCSC Ensembl
Innerchr16:29475359..29494626hg18UCSC Ensembl
Outerchr16:29475322..29496107hg18UCSC Ensembl
Innerchr16:29475359..29494626hg17UCSC Ensembl
Outerchr16:29475322..29496107hg17UCSC Ensembl
Cytoband16p11.2
Allele length
AssemblyAllele length
hg3820786
hg1920786
hg1820786
hg1720786
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9428
Supporting Variants
SamplesNA18564
Known GenesLOC440354
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv22843
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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