A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv22636



Internal ID15488964
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:16311026..16311968hg38UCSC Ensembl
Outerchr16:16309701..16312419hg38UCSC Ensembl
Innerchr16:16404883..16405825hg19UCSC Ensembl
Outerchr16:16403558..16406276hg19UCSC Ensembl
Innerchr16:16312384..16313326hg18UCSC Ensembl
Outerchr16:16311059..16313777hg18UCSC Ensembl
Innerchr16:16312384..16313326hg17UCSC Ensembl
Outerchr16:16311059..16313777hg17UCSC Ensembl
Cytoband16p13.11
Allele length
AssemblyAllele length
hg382719
hg192719
hg182719
hg172719
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9363
Supporting Variants
SamplesNA18552
Known GenesMIR3180-1, MIR3180-2, MIR3180-3
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv22636
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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