A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv22608



Internal ID15490032
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:21731399..21795557hg38UCSC Ensembl
Outerchr16:21730748..21797844hg38UCSC Ensembl
Innerchr16:21742720..21806878hg19UCSC Ensembl
Outerchr16:21742069..21809165hg19UCSC Ensembl
Innerchr16:21650221..21714379hg18UCSC Ensembl
Outerchr16:21649570..21716666hg18UCSC Ensembl
Innerchr16:21650221..21714379hg17UCSC Ensembl
Outerchr16:21649570..21716666hg17UCSC Ensembl
Cytoband16p12.1
Allele length
AssemblyAllele length
hg3867097
hg1967097
hg1867097
hg1767097
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9397
Supporting Variants
SamplesNA18564
Known GenesOTOA, RRN3P1
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv22608
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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