A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv22543



Internal ID15833651
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr11:104854418..104888859hg38UCSC Ensembl
Outerchr11:104853878..104889310hg38UCSC Ensembl
Innerchr11:104725145..104759586hg19UCSC Ensembl
Outerchr11:104724605..104760037hg19UCSC Ensembl
Innerchr11:104230355..104264796hg18UCSC Ensembl
Outerchr11:104229815..104265247hg18UCSC Ensembl
Innerchr11:104230355..104264796hg17UCSC Ensembl
Outerchr11:104229815..104265247hg17UCSC Ensembl
Cytoband11q22.3
Allele length
AssemblyAllele length
hg3835433
hg1935433
hg1835433
hg1735433
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8869
Supporting Variants
SamplesNA18504
Known GenesCASP12
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv22543
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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