A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv22509



Internal ID15831177
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:22018282..22022701hg38UCSC Ensembl
Outerchr15:22017226..22028343hg38UCSC Ensembl
Innerchr15:22306233..22310652hg19UCSC Ensembl
Outerchr15:22305177..22316294hg19UCSC Ensembl
Innerchr15:19807597..19812016hg18UCSC Ensembl
Outerchr15:19806541..19817658hg18UCSC Ensembl
Innerchr15:19807597..19812016hg17UCSC Ensembl
Outerchr15:19806541..19817658hg17UCSC Ensembl
Cytoband15q11.2
Allele length
AssemblyAllele length
hg3811118
hg1911118
hg1811118
hg1711118
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9179
Supporting Variants
SamplesNA12740
Known GenesLOC727924
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv22509
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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