A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv22485



Internal ID15488217
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:29119027..29122453hg38UCSC Ensembl
Outerchr15:29118128..29122991hg38UCSC Ensembl
Innerchr15:29411230..29414656hg19UCSC Ensembl
Outerchr15:29410331..29415194hg19UCSC Ensembl
Innerchr15:27198522..27201948hg18UCSC Ensembl
Outerchr15:27197623..27202486hg18UCSC Ensembl
Innerchr15:27198522..27201948hg17UCSC Ensembl
Outerchr15:27197623..27202486hg17UCSC Ensembl
Cytoband15q13.1
Allele length
AssemblyAllele length
hg384864
hg194864
hg184864
hg174864
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9228
Supporting Variants
SamplesNA18537
Known GenesAPBA2, FAM189A1
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv22485
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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