A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv22479



Internal ID15831121
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:22007920..22015551hg38UCSC Ensembl
Outerchr15:22007482..22015979hg38UCSC Ensembl
Innerchr15:22295871..22303502hg19UCSC Ensembl
Outerchr15:22295433..22303930hg19UCSC Ensembl
Innerchr15:19797235..19804866hg18UCSC Ensembl
Outerchr15:19796797..19805294hg18UCSC Ensembl
Innerchr15:19797235..19804866hg17UCSC Ensembl
Outerchr15:19796797..19805294hg17UCSC Ensembl
Cytoband15q11.2
Allele length
AssemblyAllele length
hg388498
hg198498
hg188498
hg178498
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9179
Supporting Variants
SamplesNA12740
Known GenesLOC727924
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv22479
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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