A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv22477



Internal ID15829854
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:20013359..20753120hg38UCSC Ensembl
Outerchr15:20012367..20753972hg38UCSC Ensembl
Innerchr15:20218612..20958449hg19UCSC Ensembl
Outerchr15:20217620..20959301hg19UCSC Ensembl
Innerchr15:18478626..19218462hg18UCSC Ensembl
Outerchr15:18477634..19219313hg18UCSC Ensembl
Innerchr15:18478626..19218462hg17UCSC Ensembl
Outerchr15:18477634..19219313hg17UCSC Ensembl
Cytoband15q11.1
Allele length
AssemblyAllele length
hg38741606
hg19741682
hg18741680
hg17741680
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9179
Supporting Variants
SamplesNA11830
Known GenesCHEK2P2, GOLGA6L6, GOLGA8CP, HERC2P3, LOC646214, NBEAP1
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv22477
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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