A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv22476



Internal ID15482881
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:33283946..33374775hg38UCSC Ensembl
Outerchr16:33282279..33375130hg38UCSC Ensembl
Innerchr16:33185187..33276016hg19UCSC Ensembl
Outerchr16:33183520..33276371hg19UCSC Ensembl
Innerchr16:33092688..33183517hg18UCSC Ensembl
Outerchr16:33091021..33183872hg18UCSC Ensembl
Innerchr16:33092688..33183517hg17UCSC Ensembl
Outerchr16:33091021..33183872hg17UCSC Ensembl
Cytoband16p11.2
Allele length
AssemblyAllele length
hg3892852
hg1992852
hg1892852
hg1792852
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9439
Supporting Variants
SamplesNA10863
Known GenesTP53TG3, TP53TG3B, TP53TG3C
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv22476
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer