A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv22463



Internal ID15839551
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:87114217..87217020hg38UCSC Ensembl
Outerchr10:87109696..87217554hg38UCSC Ensembl
Innerchr10:88873974..88976777hg19UCSC Ensembl
Outerchr10:88869453..88977311hg19UCSC Ensembl
Innerchr10:88863954..88966757hg18UCSC Ensembl
Outerchr10:88859433..88967291hg18UCSC Ensembl
Innerchr10:88863954..88966757hg17UCSC Ensembl
Outerchr10:88859433..88967291hg17UCSC Ensembl
Cytoband10q23.2
Allele length
AssemblyAllele length
hg38107859
hg19107859
hg18107859
hg17107859
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8715
Supporting Variants
SamplesNA18972
Known GenesFAM35A
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv22463
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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