A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv22409



Internal ID15843022
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:24821078..24837186hg38UCSC Ensembl
Outerchr15:24819345..24846482hg38UCSC Ensembl
Innerchr15:25066225..25082333hg19UCSC Ensembl
Outerchr15:25064492..25091629hg19UCSC Ensembl
Innerchr15:22617318..22633426hg18UCSC Ensembl
Outerchr15:22615585..22642722hg18UCSC Ensembl
Innerchr15:22617318..22633426hg17UCSC Ensembl
Outerchr15:22615585..22642722hg17UCSC Ensembl
Cytoband15q11.2
Allele length
AssemblyAllele length
hg3827138
hg1927138
hg1827138
hg1727138
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9197
Supporting Variants
SamplesNA19173
Known GenesSNRPN
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv22409
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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