A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv22346



Internal ID15494369
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:32419228..32434674hg38UCSC Ensembl
Outerchr15:32417706..32435152hg38UCSC Ensembl
Innerchr15:32711429..32726875hg19UCSC Ensembl
Outerchr15:32709907..32727353hg19UCSC Ensembl
Innerchr15:30498721..30514167hg18UCSC Ensembl
Outerchr15:30497199..30514645hg18UCSC Ensembl
Innerchr15:30498721..30514167hg17UCSC Ensembl
Outerchr15:30497199..30514645hg17UCSC Ensembl
Cytoband15q13.3
Allele length
AssemblyAllele length
hg3817447
hg1917447
hg1817447
hg1717447
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9238
Supporting Variants
SamplesNA19007
Known GenesULK4P1, ULK4P2, ULK4P3
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv22346
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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