A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv22299



Internal ID15831539
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:20167412..20238377hg38UCSC Ensembl
Outerchr15:20167051..20239333hg38UCSC Ensembl
Innerchr15:20372665..20443630hg19UCSC Ensembl
Outerchr15:20372304..20444586hg19UCSC Ensembl
Innerchr15:18632679..18703644hg18UCSC Ensembl
Outerchr15:18632318..18704600hg18UCSC Ensembl
Innerchr15:18632679..18703644hg17UCSC Ensembl
Outerchr15:18632318..18704600hg17UCSC Ensembl
Cytoband15q11.1
Allele length
AssemblyAllele length
hg3872283
hg1972283
hg1872283
hg1772283
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9179
Supporting Variants
SamplesNA12740
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv22299
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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