A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv22289



Internal ID15843002
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:23174492..23189557hg38UCSC Ensembl
Outerchr15:23174492..23190651hg38UCSC Ensembl
Innerchr15:22683511..22699778hg19UCSC Ensembl
Outerchr15:22682417..22699897hg19UCSC Ensembl
Innerchr15:20234875..20251142hg18UCSC Ensembl
Outerchr15:20233781..20251261hg18UCSC Ensembl
Innerchr15:20234875..20251142hg17UCSC Ensembl
Outerchr15:20233781..20251261hg17UCSC Ensembl
Cytoband15q11.2
Allele length
AssemblyAllele length
hg3816160
hg1917481
hg1817481
hg1717481
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9181
Supporting Variants
SamplesNA19173
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv22289
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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