A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv22236



Internal ID15482806
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:32241586..32267207hg38UCSC Ensembl
Outerchr16:32241524..32267530hg38UCSC Ensembl
Innerchr16:32252907..32278528hg19UCSC Ensembl
Outerchr16:32252845..32278851hg19UCSC Ensembl
Innerchr16:32160408..32186029hg18UCSC Ensembl
Outerchr16:32160346..32186352hg18UCSC Ensembl
Innerchr16:32160408..32186029hg17UCSC Ensembl
Outerchr16:32160346..32186352hg17UCSC Ensembl
Cytoband16p11.2
Allele length
AssemblyAllele length
hg3826007
hg1926007
hg1826007
hg1726007
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9439
Supporting Variants
SamplesNA10863
Known GenesTP53TG3D
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv22236
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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