A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv22215



Internal ID15834828
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:22009128..22301263hg38UCSC Ensembl
Outerchr15:22008875..22301774hg38UCSC Ensembl
Innerchr15:22297079..22589214hg19UCSC Ensembl
Outerchr15:22296826..22589725hg19UCSC Ensembl
Innerchr15:19798443..20090578hg18UCSC Ensembl
Outerchr15:19798190..20091089hg18UCSC Ensembl
Innerchr15:19798443..20090578hg17UCSC Ensembl
Outerchr15:19798190..20091089hg17UCSC Ensembl
Cytoband15q11.2
Allele length
AssemblyAllele length
hg38292900
hg19292900
hg18292900
hg17292900
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9179
Supporting Variants
SamplesNA18537
Known GenesLOC727924, OR4M2, OR4N3P, OR4N4, REREP3
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv22215
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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