A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv22196



Internal ID15494383
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:30196023..30393338hg38UCSC Ensembl
Outerchr15:30195038..30393816hg38UCSC Ensembl
Innerchr15:30488226..30685541hg19UCSC Ensembl
Outerchr15:30487241..30686019hg19UCSC Ensembl
Innerchr15:28275518..28472833hg18UCSC Ensembl
Outerchr15:28274533..28473311hg18UCSC Ensembl
Innerchr15:28275518..28472833hg17UCSC Ensembl
Outerchr15:28274533..28473311hg17UCSC Ensembl
Cytoband15q13.2
Allele length
AssemblyAllele length
hg38198779
hg19198779
hg18198779
hg17198779
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9232
Supporting Variants
SamplesNA19007
Known GenesCHRFAM7A, DKFZP434L187
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv22196
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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