A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv22166



Internal ID15494387
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:30103430..30119393hg38UCSC Ensembl
Outerchr15:30102550..30120915hg38UCSC Ensembl
Innerchr15:30395633..30411596hg19UCSC Ensembl
Outerchr15:30394753..30413118hg19UCSC Ensembl
Innerchr15:28182925..28198888hg18UCSC Ensembl
Outerchr15:28182045..28200410hg18UCSC Ensembl
Innerchr15:28182925..28198888hg17UCSC Ensembl
Outerchr15:28182045..28200410hg17UCSC Ensembl
Cytoband15q13.2
Allele length
AssemblyAllele length
hg3818366
hg1918366
hg1818366
hg1718366
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9232
Supporting Variants
SamplesNA19007
Known GenesULK4P1, ULK4P2, ULK4P3
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv22166
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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