A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv22072



Internal ID15492097
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:89587552..89588264hg38UCSC Ensembl
Outerchr16:89586703..89589344hg38UCSC Ensembl
Innerchr16:89653960..89654672hg19UCSC Ensembl
Outerchr16:89653111..89655752hg19UCSC Ensembl
Innerchr16:88181461..88182173hg18UCSC Ensembl
Outerchr16:88180612..88183253hg18UCSC Ensembl
Innerchr16:88181461..88182173hg17UCSC Ensembl
Outerchr16:88180612..88183253hg17UCSC Ensembl
Cytoband16q24.3
Allele length
AssemblyAllele length
hg382642
hg192642
hg182642
hg172642
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9477
Supporting Variants
SamplesNA18942
Known GenesCPNE7
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv22072
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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