A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv22026



Internal ID15482737
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:28278255..28286798hg38UCSC Ensembl
Outerchr16:28277776..28287520hg38UCSC Ensembl
Innerchr16:28289576..28298119hg19UCSC Ensembl
Outerchr16:28289097..28298841hg19UCSC Ensembl
Innerchr16:28197077..28205620hg18UCSC Ensembl
Outerchr16:28196598..28206342hg18UCSC Ensembl
Innerchr16:28197077..28205620hg17UCSC Ensembl
Outerchr16:28196598..28206342hg17UCSC Ensembl
Cytoband16p11.2
Allele length
AssemblyAllele length
hg389745
hg199745
hg189745
hg179745
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9412
Supporting Variants
SamplesNA10863
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv22026
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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