A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv21961



Internal ID15844823
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr11:4218651..4356896hg38UCSC Ensembl
Outerchr11:4217809..4366038hg38UCSC Ensembl
Innerchr11:4239881..4378126hg19UCSC Ensembl
Outerchr11:4239039..4387268hg19UCSC Ensembl
Innerchr11:4196457..4334702hg18UCSC Ensembl
Outerchr11:4195615..4343844hg18UCSC Ensembl
Innerchr11:4196457..4334702hg17UCSC Ensembl
Outerchr11:4195615..4343844hg17UCSC Ensembl
Cytoband11p15.4
Allele length
AssemblyAllele length
hg38148230
hg19148230
hg18148230
hg17148230
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8777
Supporting Variants
SamplesNA19240
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv21961
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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