A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv21953



Internal ID15839534
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:46840043..46840508hg38UCSC Ensembl
Outerchr10:46839708..46841068hg38UCSC Ensembl
Innerchr10:46712321..46712786hg19UCSC Ensembl
Outerchr10:46711761..46713125hg19UCSC Ensembl
Innerchr10:46132327..46132792hg18UCSC Ensembl
Outerchr10:46131767..46133131hg18UCSC Ensembl
Innerchr10:46132327..46132792hg17UCSC Ensembl
Outerchr10:46131767..46133131hg17UCSC Ensembl
Cytoband10q11.22
Allele length
AssemblyAllele length
hg381361
hg191365
hg181365
hg171365
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8636
Supporting Variants
SamplesNA18972
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv21953
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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