A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv21942



Internal ID15833046
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:125886822..125902974hg38UCSC Ensembl
Outerchr10:125884747..125905606hg38UCSC Ensembl
Innerchr10:127575391..127591543hg19UCSC Ensembl
Outerchr10:127573316..127594175hg19UCSC Ensembl
Innerchr10:127565381..127581533hg18UCSC Ensembl
Outerchr10:127563306..127584165hg18UCSC Ensembl
Innerchr10:127565381..127581533hg17UCSC Ensembl
Outerchr10:127563306..127584165hg17UCSC Ensembl
Cytoband10q26.2
Allele length
AssemblyAllele length
hg3820860
hg1920860
hg1820860
hg1720860
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8738
Supporting Variants
SamplesNA18502
Known GenesFANK1
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv21942
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer