A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv21931



Internal ID15844822
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr11:3367591..3368132hg38UCSC Ensembl
Outerchr11:3364412..3370627hg38UCSC Ensembl
Innerchr11:3388821..3389362hg19UCSC Ensembl
Outerchr11:3385642..3391857hg19UCSC Ensembl
Innerchr11:3345397..3345938hg18UCSC Ensembl
Outerchr11:3342218..3348433hg18UCSC Ensembl
Innerchr11:3345397..3345938hg17UCSC Ensembl
Outerchr11:3342218..3348433hg17UCSC Ensembl
Cytoband11p15.4
Allele length
AssemblyAllele length
hg386216
hg196216
hg186216
hg176216
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8771
Supporting Variants
SamplesNA19240
Known GenesZNF195
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv21931
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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