A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv21921



Internal ID15838151
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:46332711..46360467hg38UCSC Ensembl
Outerchr10:46332711..46361047hg38UCSC Ensembl
Innerchr10:47190313..47223130hg19UCSC Ensembl
Outerchr10:47189733..47223338hg19UCSC Ensembl
Innerchr10:46610319..46643136hg18UCSC Ensembl
Outerchr10:46609739..46643344hg18UCSC Ensembl
Innerchr10:46610319..46643136hg17UCSC Ensembl
Outerchr10:46609739..46643344hg17UCSC Ensembl
Cytoband10q11.22
Allele length
AssemblyAllele length
hg3828337
hg1933606
hg1833606
hg1733606
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8636
Supporting Variants
SamplesNA18860
Known GenesAGAP9
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv21921
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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