A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv21895



Internal ID15840734
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:21192131..22303333hg38UCSC Ensembl
Innerchr15:21397460..22591284hg19UCSC Ensembl
Innerchr15:19662119..20092648hg18UCSC Ensembl
Innerchr15:19662119..20092648hg17UCSC Ensembl
Outerchr15:19661464..20197782hg17UCSC Ensembl
Cytoband15q11.2
Allele length
AssemblyAllele length
hg381111203
hg191193825
hg18430530
hg17536319
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9179
Supporting Variants
SamplesNA18980
Known GenesCXADRP2, LOC646214, LOC727924, NF1P2, OR4M2, OR4N3P, OR4N4, POTEB, POTEB2, REREP3
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv21895
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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