A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv21874



Internal ID15828473
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:20954232..20963163hg38UCSC Ensembl
Outerchr15:20952621..20964146hg38UCSC Ensembl
Innerchr15:21159561..21168492hg19UCSC Ensembl
Outerchr15:21157950..21169475hg19UCSC Ensembl
Innerchr15:19424220..19433151hg18UCSC Ensembl
Outerchr15:19422609..19434134hg18UCSC Ensembl
Innerchr15:19424220..19433151hg17UCSC Ensembl
Outerchr15:19422609..19434134hg17UCSC Ensembl
Cytoband15q11.2
Allele length
AssemblyAllele length
hg3811526
hg1911526
hg1811526
hg1711526
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9179
Supporting Variants
SamplesNA10839
Known GenesCT60
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv21874
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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