A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv21865



Internal ID15840743
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:20466536..21145811hg38UCSC Ensembl
Outerchr15:20466235..21146609hg38UCSC Ensembl
Innerchr15:20671789..21351140hg19UCSC Ensembl
Outerchr15:20671488..21351938hg19UCSC Ensembl
Innerchr15:18931803..19615799hg18UCSC Ensembl
Outerchr15:18931502..19616597hg18UCSC Ensembl
Innerchr15:18931803..19615799hg17UCSC Ensembl
Outerchr15:18931502..19616597hg17UCSC Ensembl
Cytoband15q11.1
Allele length
AssemblyAllele length
hg38680375
hg19680451
hg18685096
hg17685096
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9179
Supporting Variants
SamplesNA18980
Known GenesCT60, CXADRP2, GOLGA6L6, GOLGA8CP, HERC2P3, LOC646214, NBEAP1, NF1P2, POTEB, POTEB2
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv21865
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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