A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv21861



Internal ID15838133
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:46588619..46739317hg38UCSC Ensembl
Outerchr10:46588286..46739380hg38UCSC Ensembl
Innerchr10:46810300..46960998hg19UCSC Ensembl
Outerchr10:46810237..46961331hg19UCSC Ensembl
Innerchr10:46230306..46381004hg18UCSC Ensembl
Outerchr10:46230243..46381337hg18UCSC Ensembl
Innerchr10:46230306..46381004hg17UCSC Ensembl
Outerchr10:46230243..46381337hg17UCSC Ensembl
Cytoband10q11.22
Allele length
AssemblyAllele length
hg38151095
hg19151095
hg18151095
hg17151095
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8636
Supporting Variants
SamplesNA18860
Known GenesFAM35BP, SYT15
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv21861
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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