A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv21814



Internal ID15828482
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:20359383..20420215hg38UCSC Ensembl
Outerchr15:20359035..20420626hg38UCSC Ensembl
Innerchr15:20564636..20625468hg19UCSC Ensembl
Outerchr15:20564288..20625879hg19UCSC Ensembl
Innerchr15:18824650..18885482hg18UCSC Ensembl
Outerchr15:18824302..18885893hg18UCSC Ensembl
Innerchr15:18824650..18885482hg17UCSC Ensembl
Outerchr15:18824302..18885893hg17UCSC Ensembl
Cytoband15q11.1
Allele length
AssemblyAllele length
hg3861592
hg1961592
hg1861592
hg1761592
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9179
Supporting Variants
SamplesNA10839
Known GenesHERC2P3
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv21814
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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