A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv21808



Internal ID15842310
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr12:11394462..11415789hg38UCSC Ensembl
Outerchr12:11393678..11422256hg38UCSC Ensembl
Innerchr12:11547396..11568723hg19UCSC Ensembl
Outerchr12:11546612..11575190hg19UCSC Ensembl
Innerchr12:11438663..11459990hg18UCSC Ensembl
Outerchr12:11437879..11466457hg18UCSC Ensembl
Innerchr12:11438663..11459990hg17UCSC Ensembl
Outerchr12:11437879..11466457hg17UCSC Ensembl
Cytoband12p13.2
Allele length
AssemblyAllele length
hg3828579
hg1928579
hg1828579
hg1728579
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8921
Supporting Variants
SamplesNA19144
Known GenesPRB2
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv21808
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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