A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv21738



Internal ID15836583
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:21978894..22127107hg38UCSC Ensembl
Outerchr15:21977969..22127499hg38UCSC Ensembl
Innerchr15:22266845..22415058hg19UCSC Ensembl
Outerchr15:22265920..22415450hg19UCSC Ensembl
Innerchr15:19768209..19916422hg18UCSC Ensembl
Outerchr15:19767284..19916814hg18UCSC Ensembl
Innerchr15:19768209..19916422hg17UCSC Ensembl
Outerchr15:19767284..19916814hg17UCSC Ensembl
Cytoband15q11.2
Allele length
AssemblyAllele length
hg38149531
hg19149531
hg18149531
hg17149531
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9179
Supporting Variants
SamplesNA18564
Known GenesLOC727924, OR4M2, OR4N3P, OR4N4
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv21738
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer