A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv21640



Internal ID15831971
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr19:15652125..15664238hg38UCSC Ensembl
Outerchr19:15649504..15665950hg38UCSC Ensembl
Innerchr19:15762935..15775048hg19UCSC Ensembl
Outerchr19:15760314..15776760hg19UCSC Ensembl
Innerchr19:15623935..15636048hg18UCSC Ensembl
Outerchr19:15621314..15637760hg18UCSC Ensembl
Innerchr19:15623935..15636048hg17UCSC Ensembl
Outerchr19:15621314..15637760hg17UCSC Ensembl
Cytoband19p13.12
Allele length
AssemblyAllele length
hg3816447
hg1916447
hg1816447
hg1716447
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9670
Supporting Variants
SamplesNA12802
Known GenesCYP4F3
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv21640
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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